Author

Julia Chifman

American UniversityORCID 0000-0002-7520-0627Unclaimed ORCID profile · follow to get notified of new preprints

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Julia Chifman1 paper

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:software / tool· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Adam KnappiD· 2 shared Luis Sordo VieiraiD· 1 shared Reinhard LaubenbacheriD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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2 shared papersEvolutionary Biology

Adam KnappORCID

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2 papers

Recent·Most cited

Generalized Maternal-Paternal Genotype Markov Model for Single-Cell Lineages

Julia Chifman, Adam Knapp

The paper develops a generalized maternal-paternal genotype Markov model for diploid DNA, exploring its mathematical formulations and comparing it to existing unphased models.

bioRxiv · Oct 2, 2026 · PreprintEvolutionary Biology

SteadyCellPhenotype: A web-based tool for the modeling of biological networks with ternary logic

Adam Knapp, Luis Sordo Vieira, Reinhard Laubenbacher, Julia Chifman

SteadyCellPhenotype models ternary biological networks by finding steady states and simulating trajectories with visualization tools.

Bioinformatics · Feb 14, 2022Peer-reviewedBioinformatics