BioinformaticsAgriculture CommunicationsPeer-reviewed
Comparative evaluation of reference genomes and cell-type annotation frameworks for single-nucleus transcriptomic analysis in apple
Sun Hu, Yiqi Liu, Yujie Zhao…·Jian Jiao
The paper evaluates reference genomes and cell-type annotation frameworks for snRNA-seq in apple, finding that GDDH13 provides the best mapping and annotation performance, and that combining marker genes with cross-species frameworks improves cell-type identification.
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