Large scale automated phylogenomic analysis of bacterial whole-genome isolates and the Evergreen platform
Judit Szarvas, Johanne Ahrenfeldt, Jose Luis Bellod Cisneros, Martin Christen Frølund Thomsen, Frank M. Aarestrup, Ole Lund
The paper introduces a bioinformatics pipeline for rapid phylogenomic analysis of bacterial whole-genome isolates, enabling large-scale surveillance and real-time outbreak detection.
Communications Biology · Mar 20, 2020Peer-reviewedBioinformatics