Steven Wu

MicroFisher improves fungal classification in metagenomic and metatranscriptomic data using multiple hypervariable markers, showing high accuracy in synthetic and environmental samples.

AFPhyloMix reconstructs haplotype phylogenies from pooled short-read sequences without barcoding, achieving 80% accuracy for up to 15 haplotypes in simulations and real data.

accuMUlate is a mutation caller designed for mutation accumulation experiments, providing probabilistic modeling and filtering tools to identify and quantify mutations.