Author

Frank Austin Nothaft

Databricks (United States)ORCID 0000-0002-7729-7055Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Research Focus:batch correction / integration· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:software / tool· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Anthony D. JosephiD· 2 shared Adam Novak· 1 shared Alden D. Deran· 1 shared Alyssa MorrowiD· 1 shared Arjun Rao· 1 shared Audrey Musselman-Brown· 1 shared Benedict PateniD· 1 shared Brian CraftiD· 1 shared

Activity by Year

2016-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Anthony D. JosephORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Mango: Distributed Visualization for Genomic Analysis

Alyssa Morrow, George Zhixuan He, Frank Austin Nothaft, Eric Tongching Tu, Justin E. Paschall, Nir Yosef, Anthony D. Joseph

Mango enables interactive genomic analysis of large sequencing datasets by leveraging cloud-based multi-node clusters, overcoming scalability and staticity limitations of existing tools.

bioRxiv · Jul 3, 2018 · PreprintBioinformatics

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

John Vivian, Arjun Rao, Frank Austin Nothaft, Christopher Ketchum, Joel Armstrong, Adam Novak, Jacob Pfeil, Jake Narkizian, Alden D. Deran, Audrey Musselman-Brown, Hannes Schmidt, Peter Amstutz, Brian Craft, Mary Goldman, Kate Rosenbloom, , Benedict Paten

The paper demonstrates Toil's ability to efficiently process 20,000 RNA-seq samples to create a batch-effect-free meta-analysis across five datasets.

bioRxiv · Jul 7, 2016Bioinformatics