Author

Andrew K. Jones

Oxford Brookes UniversityORCID 0000-0002-7835-0890Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:large language model· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Adam M. PhillippyiD· 1 shared Albin FontaineiD· 1 shared Alex R. HastieiD· 1 shared Alex WilsoniD· 1 shared Alexander S. RaikheliD· 1 shared Alistair C. DarbyiD· 1 shared Allison M. WeakleyiD· 1 shared Andrea Gloria‐SoriaiD· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenomics

Adam M. PhillippyORCID

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2 papers

Recent·Most cited

MetaBeeAI: an AI pipeline for structured evidence extraction from biological literature

Rachel H. Parkinson, Henry Cerbone, Mikael Mieskolainen, Shuxiang Cao, Alex Wilson, Sergio Albacete, Emily B. Armstrong, Chris Bass, Cristina Botías, Andrew Brown, Angela Hayward, Lina Herbertsson, Andrew K. Jones, Nicolas Nagloo, Elizabeth Nicholls, , Stephen J. Roberts

MetaBeeAI extracts structured evidence from biological literature using a modular LLM pipeline with expert validation, improving consistency and reproducibility across studies.

Ecological Informatics · May 21, 2026Peer-reviewedEcology

Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control

Benjamin John Matthews, Olga Dudchenko, Sarah B. Kingan, Sergey Koren, Igor A. Antoshechkin, Jacob E. Crawford, William J. Glassford, Margaret Herre, Seth N. Redmond, Noah H. Rose, Gareth D. Weedall, Yang Wu, Sanjit Singh Batra, Carlos A. Brito-Sierra, Steven David Buckingham, , Leslie B. Vosshall

The paper presents an improved Aedes aegypti genome assembly, AaegL5, which enhances biological understanding and vector control efforts by resolving key genomic features and identifying new targets for intervention.

Nature · Nov 14, 2018Peer-reviewedGenomics