Vincent Pedergnana

MutaPhy detects genotype-phenotype associations in pathogens by analyzing phylogenetic trees, revealing lineage-level associations while reducing false positives.

This study identifies genetic risk factors and host-viral interactions for cirrhosis progression in hepatitis C virus-infected patients but finds no genome-wide significant associations for hepatocellular carcinoma.

The paper conducts a GWAS to identify genetic polymorphisms associated with vaginal microbiota diversity in French women using data from the PAPCLEAR cohort.

This study presents whole-genome sequencing data from 4,810 Singaporeans across three ethnic groups, revealing genetic structure, admixture, and improved imputation for Asian and Oceanian populations.

The paper identifies two EBV variants in BALF2 associated with increased NPC risk through genome sequencing and association studies in China.

The paper examines the impact of IFN-lambda4 on HCV diversity using host and viral genetic data from 485 patients, finding that IFN-lambda4 variants influence viral amino acid diversity and load.