Author

Vincent A. Bielinski

J. Craig Venter InstituteORCID 0000-0002-8107-8752Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:software / tool· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Assay:long-read sequencing· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Christopher L. DupontiD· 2 shared Alfonzo Poire· 1 shared Andrew Ellis AlleniD· 1 shared Anthony K. KangiD· 1 shared Anton KaniD· 1 shared Ariel CerdaiD· 1 shared Bernardo PollakiD· 1 shared Bogumil Jacek KarasiD· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersSynthetic Biology

Christopher L. DupontORCID

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3 papers

Recent·Most cited

LoopViz: A uLoop Assembly Clone Verification Tool for Nanopore Sequencing Reads

Mariele Lensink, Bradley W. Abramson, Nolan T. Hartwick, Alfonzo Poire, Vincent A. Bielinski, Todd P. Michael

LoopViz validates and analyzes uLOOP cloning reactions using long-read sequencing to determine plasmid sequences quickly and cost-effectively.

bioRxiv · Feb 1, 2021 · PreprintBioinformatics

Universal Loop assembly (uLoop): open, efficient, and species-agnostic DNA fabrication

Bernardo Pollak, Tamara Matúte, Isaac Núñez, Ariel Cerda, Constanza López, Valentina Vargas-Torres, Anton Kan, Vincent A. Bielinski, Peter von Dassow, Christopher L. Dupont, Fernán Federici

The paper introduces uLoop, a DNA assembly method that enables efficient, hierarchical fabrication of large DNA constructs across any organism.

bioRxiv · Aug 26, 2019 · PreprintSynthetic Biology

Diatom Centromeres Suggest a Novel Mechanism for Nuclear Gene Acquisition

Rachel E. Diner, Chari M. Noddings, Nathan C. Lian, Anthony K. Kang, Jeffrey B. McQuaid, Jelena Jablanovic, Josh L. Espinoza, Ngocquynh A. Nguyen, Miguel A. Anzelmatti, Jakob Jansson, Vincent A. Bielinski, Bogumil Jacek Karas, Christopher L. Dupont, Andrew Ellis Allen, Philip D. Weyman

The paper identifies diatom centromeres and shows that non-native DNA sequences can function as centromeres, suggesting a mechanism for foreign DNA acquisition.

Proceedings of the National Academy of Sciences · Jul 3, 2017Peer-reviewedMolecular Biology