Author

Sébastien Renaut

Institut universitaire de cardiologie et de pneumologie de QuébecORCID 0000-0002-8111-5082Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Genomics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Dominique K. BoudreauiD· 2 shared Yohan BosséiD· 2 shared Alexandra Jochmans‐LemoineiD· 1 shared Arthur E. BoganiD· 1 shared Davide GuerraiD· 1 shared Donald T. StewartiD· 1 shared Fabrizio GhiselliiD· 1 shared François Marcouillier· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersPhysiology

Dominique K. BoudreauORCID

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3 papers

Recent·Most cited

PhysiologybioRxivPreprintAug 5, 2025

Cell-Specific Transcriptomic and Mito-Nuclear Imbalance in Lungs Under Intermittent Hypoxia in Adult Male Mice.

Alexandra Jochmans‐Lemoine, François Marcouillier, Marie Martelat…·Vincent Joseph

This study examines real-time transcriptional responses to intermittent hypoxia in lung tissue of male mice, revealing cell-type-specific changes and mito-nuclear imbalance.

DOI 10.1101/2025.08.05.668735

mousescRNA-seq

Cancer BiologyPLoS GeneticsPeer-reviewedMay 30, 2024

Single-cell and single-nucleus RNA-sequencing from paired normal-adenocarcinoma lung samples provide both common and discordant biological insights

Sébastien Renaut, Victoria E. S. Armero, Dominique K. Boudreau…·Yohan Bossé

This study compares scRNA-seq and snRNA-seq in lung samples, finding differences in cell type composition and biological insights between fresh and frozen tissues.

21 citations

humanscRNA-seq

GenomicsGenome Biology and EvolutionPeer-reviewedJun 4, 2018

Genome survey of the freshwater mussel Venustaconcha ellipsiformis (Bivalvia: Unionida) using a hybrid de novo assembly approach.

Sébastien Renaut, Davide Guerra, Walter R. Hoeh…·Sophie Breton

The paper assembles and annotates the genome of Venustaconcha ellipsiformis using a hybrid approach, revealing genomic features and mitochondrial polymorphisms.

46 citations

whole-genome sequencingstatistical model