Author

Yingfu Wu

Northwestern Polytechnical UniversityORCID 0000-0002-8142-6999Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:contrastive learning· 1 Approach:deep learning· 1 Approach:graph neural network· 1 Assay:metagenomics· 1 Organism:mouse· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Xingyi LiiD· 2 shared Xuequn ShangiD· 2 shared Dongmin ZhaoiD· 1 shared Gaoyuan Du· 1 shared Jialuo XuiD· 1 shared Junnan ZhuiD· 1 shared Min LiiD· 1 shared Qi YangiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Xingyi LiORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 11, 2025

A Multimodal Graph Learning Framework for Versatile Spatial Transcriptomics Analysis with SpatialModal

Xingyi Li, Dongmin Zhao, Xiangting Jia…·Xuequn Shang

SpatialModal integrates gene expression and histological images in spatial transcriptomics to improve spatial analysis and domain identification.

DOI 10.1101/2025.05.11.653070

mousespatial transcriptomics

𝕏 PostBluesky

BioinformaticsACS Synthetic BiologyPeer-reviewedApr 22, 2025

Deep Learning-Based Classification of CRISPR Loci Using Repeat Sequences

Xingyu Liao, Yanyan Li, Yingfu Wu…·Xuequn Shang

This paper introduces a deep learning method to classify CRISPR-Cas systems using repeat sequences, improving classification accuracy for subtypes with limited data.

2 citations

metagenomicsdeep learning

𝕏 PostBluesky