Author

Ulaş Karaöz

Lawrence Berkeley National LaboratoryORCID 0000-0002-8238-6757Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 3 Approach:statistical model· 2 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Eoin BrodieiD· 2 shared Adam M. BreisteriD· 1 shared Allison M. SharrariD· 1 shared Allison R. WongiD· 1 shared Carlos GarbisuiD· 1 shared David W. HoytiD· 1 shared Elise S. CowleyiD· 1 shared Elizabeth K. Eder· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

Eoin BrodieORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

MicrobiologyNature MicrobiologyPeer-reviewedJan 27, 2026

Coordinated organic and inorganic nitrogen transformations fuel soil microbial blooms and increase nitrogen retention during snowmelt

Patrick O. Sorensen, Ulaş Karaöz, Harry R. Beller…·E. Brodie

The paper shows that microbial blooms during snowmelt drive nitrogen transformations, increasing nitrogen retention through organic and inorganic pathways.

13 citationstop 1%

metagenomicsexperimental assay

𝕏 PostBluesky

GenomicsbioRxivPreprintOct 22, 2025

The long-term application of composted organic wastes caused a lasting increase in vineyard soil health and multifunctionality

Lur Epelde, Ulaş Karaöz, Carlos Garbisu…·Eoin Brodie

This study shows that long-term composted organic waste application improves vineyard soil health and multifunctionality, with lasting effects on microbial communities and soil properties.

1 citation

metagenomicsstatistical model

𝕏 PostBluesky

BioinformaticsMicrobiomePeer-reviewedFeb 16, 2022

METABOLIC: High-throughput profiling of microbial genomes for functional traits, biogeochemistry, and community-scale metabolic networks

Zhichao Zhou, Patricia Q. Tran, Adam M. Breister…·Karthik Anantharaman

METABOLIC is a software tool for analyzing microbial genomes to predict metabolic functions, interactions, and contributions to biogeochemical cycles, showing better performance than existing tools.

668 citationstop 1%

metagenomicsstatistical model

𝕏 PostBluesky