Author

Chris M. Bacon

Newcastle UniversityORCID 0000-0002-8268-2812Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

April Rose FosteriD· 1 shared Bayanne OlabiiD· 1 shared Benjamin M. RumneyiD· 1 shared Chloe AdmaneiD· 1 shared Constanze JonakiD· 1 shared Daniela Basurto-LozadaiD· 1 shared Dave HorsfalliD· 1 shared Ed C. SchwalbeiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperGenomics

April Rose FosterORCID

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2 papers

Recent·Most cited

Cancer BiologyBritish Journal of CancerPeer-reviewedOct 31, 2025

Deconvolution of cancer methylation patterns determines that altered methylation in cancer is dominated by a non-disease associated proliferation signal

H. Lalchungnunga, Hande Atasoy, Ed C. Schwalbe…·Gordon R. Strathdee

The paper deconvolves cancer methylation patterns to show that most methylation changes in B-cell cancers are proliferation-driven, not disease-specific, and identifies SLC22A15 as a novel tumour suppressor.

DOI 10.1038/s41416-025-03239-3

humanDNA methylation

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GenomicsbioRxivPreprintNov 6, 2023

Cutaneous T cell lymphoma atlas reveals malignant Th2 cells supported by a B cell-rich microenvironment

Ruoyan Li, Johanna Strobl, Elizabeth F. M. Poyner…·Muzlifah A. Haniffa

The paper identifies Th2-like malignant cells in CTCL supported by a B cell-rich microenvironment through single-cell and spatial transcriptomics analysis.

2 citations

humanscRNA-seq

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