Author

Caroline Lennartsson

University of CopenhagenORCID 0000-0002-8392-6858Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:proteomics· 3 Research Focus:benchmarking· 2 Organism:human· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Michael Lund NielseniD· 3 shared Ivo Alexander HendriksiD· 2 shared Jesper Velgaard OlseniD· 2 shared Lars Juhl JenseniD· 2 shared Martin RykæriD· 2 shared Nadezhda T. DonchevaiD· 2 shared Alexandra K.L.F.S. RebakiD· 1 shared Alireza NameniiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersBioinformatics

Michael Lund NielsenORCID

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3 papers

Recent·Most cited

BioinformaticsMolecular & Cellular ProteomicsPeer-reviewedMay 20, 2026

Improved peptide search for identification of SUMO and sequence-based modifications, in MaxSBM

Caroline Lennartsson, Pelagia Kyriakidou, Michael Lund Nielsen…·Ivo Alexander Hendriks

The paper introduces MaxSBM, a MaxQuant module for identifying sequence-based modifiers like SUMO, improving peptide identification rates and spectral annotation.

DOI 10.1016/j.mcpro.2026.101589

humanmouse

𝕏 PostBluesky

BioinformaticsbioRxivPreprintDec 20, 2025

ProteoBench: the community-curated platform for comparing proteomics data analysis workflows

Robbe Devreese, Caroline Jachmann, Bart Van Puyvelde…·Marie Locard‐Paulet

ProteoBench provides a centralized platform for comparing proteomics data analysis workflows, enabling benchmarking and community collaboration.

6 citations

proteomicsbenchmark study

𝕏 PostBluesky

Molecular BiologyNature Structural & Molecular BiologyPeer-reviewedFeb 6, 2024

A quantitative and site-specific atlas of the in vivo citrullinome reveals widespread existence of citrullination

Alexandra K.L.F.S. Rebak, Ivo Alexander Hendriks, Jonas Damgaard Elsborg…·Michael Lund Nielsen

The paper identifies 14,056 citrullination sites across 4,008 proteins using mass spectrometry, revealing widespread citrullination and its functional roles in histone marks and autoantigens.

45 citationstop 2%

humanproteomics

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