Author

Andreas Agathangelidis

National and Kapodistrian University of AthensORCID 0000-0002-8467-7945Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:simulation· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Anastasia Anastasiadou· 1 shared Aspasia OrfanouiD· 1 shared F. PsomopoulosiD· 1 shared Georgios KarakatsoulisiD· 1 shared Nikos PechlivanisiD· 1 shared Panagoula Kolia· 1 shared Styliani-Christina FragkouliiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Anastasia Anastasiadou

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1 paper

Recent·Most cited

Synth4bench: Synthetic Data Generation for Benchmarking Tumor-Only Somatic Variant Calling Algorithms

Styliani-Christina Fragkouli, Nikos Pechlivanis, Anastasia Anastasiadou, Georgios Karakatsoulis, Aspasia Orfanou, Panagoula Kolia, Andreas Agathangelidis, F. Psomopoulos

The paper develops synth4bench, a synthetic data pipeline to benchmark tumor-only somatic variant callers, revealing inconsistencies in tool performance and highlighting the need for sequencing optimization and caller selection.

Frontiers in Bioinformatics · Jul 16, 2026Peer-reviewedBioinformatics