Harsh Sinha

spatiAlytica enables non-programmer biologists to perform interactive spatial omics analysis using natural language and a viewer-centric agentic system.

STiLE automates TMA dearraying using cell centroid coordinates, achieving high accuracy and robustness across platforms and artifacts.

This paper presents a spatial single-cell atlas of Kaposi's sarcoma, identifying CD34+ progenitor lymphatic endothelial cells as primary targets of KSHV and revealing mechanisms of tumor progression and immune modulation.

mrQA is an open-source tool that automatically assesses MRI protocol compliance across datasets, revealing widespread non-compliance in neuroimaging studies.