Author

Cassandria G. Tay Fernandez

The University of Western AustraliaORCID 0000-0002-8518-1618Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:GWAS summary statistics· 1 Organism:plant (other)· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

David EdwardsiD· 2 shared Jacqueline BatleyiD· 2 shared Jakob PetereitiD· 2 shared Philipp E. BayeriD· 2 shared Brady JohnstoniD· 1 shared Hawlader Abdullah Al-MamuniD· 1 shared Jacob Ian MarshiD· 1 shared Mitchell GilliD· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersBioinformatics

David EdwardsORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 7, 2023

Local haplotype visualization for trait association analysis with crosshap

Jacob Ian Marsh, Jakob Petereit, Brady Johnston…·David Edwards

crosshap visualizes local haplotype structures and associations with traits using density-based clustering and visualization tools.

DOI 10.1101/2023.05.07.539781

GWAS summary statisticsstatistical model

BioinformaticsComputational and Structural Biotechnology JournalPeer-reviewedJan 1, 2023

DNABERT-based explainable lncRNA identification in plant genome assemblies

Monica F. Danilevicz, Mitchell Gill, Cassandria G. Tay Fernandez…·Philipp E. Bayer

This paper introduces a DNABERT-based NLP model to identify lncRNAs from genomic sequences across plant species, achieving accuracies between 57.9% and 83.4%.

22 citations

plant (other)whole-genome sequencing