Gabriel V. Markov

The genome of the Delisea pulchra: a resource for the study of chemical host-microbe interactions in red algae

The paper presents the genome of Delisea pulchra, revealing gene expansions related to defense mechanisms and identifying candidate genes for bromofuranone production.

Integrating metagenome-scale metabolic modelling and metabolomics to identify biochemical interactions in Microcystis phycospheres

The paper integrates metagenome-scale metabolic modeling and metabolomics to analyze Microcystis phycospheres, revealing metabolic interactions and functional differences among strains.

AuCoMe: inferring and comparing metabolisms across heterogeneous sets of annotated genomes

AuCoMe reduces technical biases in metabolic network comparisons across diverse genomes and identifies shared and divergent metabolic traits.

The genome of Ectocarpus subulatus - a highly stress-tolerant brown alga

This paper presents the genome and metabolic network of Ectocarpus subulatus, a stress-tolerant brown alga, and identifies features contributing to its stress tolerance.

Inferring biochemical reactions and metabolite structures to cope with metabolic pathway drift

The paper infers new biochemical reactions and metabolite structures in Chondrus crispus, revealing metabolic pathway drift despite conserved phenotypes.