Author

Dustin Machi

Virginia TechORCID 0000-0002-9081-6526Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:database / resource· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Andrew S. WarreniD· 2 shared Alice R. Wattam· 1 shared Alice Rebecca WattamiD· 1 shared Brian Brunk· 1 shared Bruno Sobral· 1 shared Chunhong Mao· 1 shared Cristina Aurrecoechea· 1 shared Daniel LawsoniD· 1 shared

Activity by Year

2015-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Andrew S. WarrenORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Panaconda: Application of pan-synteny graph models to genome content analysis

Andrew S. Warren, James J. Davis, Alice Rebecca Wattam, Dustin Machi, João Carlos Setúbal, Lenwood S. Heath

The paper introduces a pan-synteny graph method for analyzing multiple prokaryotic genomes, enabling the identification of genomic changes and conservation patterns without a reference genome.

bioRxiv · Nov 8, 2017 · PreprintBioinformatics

RNA-Rocket: An RNA-Seq Analysis Resource for Infectious Disease Research

Andrew S. Warren, Cristina Aurrecoechea, Brian Brunk, Prerak Desai, Scott Emrich, Gloria I. Giraldo-Calderón, Omar Harb, Deborah Hix, Daniel Lawson, Dustin Machi, Chunhong Mao, Michael McClelland, Eric Nordberg, Maulik Shukla, Leslie B. Vosshall, , Bruno Sobral

RNA-Rocket provides RNA-Seq and ChIP-Seq analysis tools for infectious disease research, offering pre-indexed genomes, educational resources, and integration with bioinformatics platforms.

Bioinformatics · Jan 7, 2015Peer-reviewedBioinformatics