Author

Gabriel Jiménez-Domínguez

Centre National de la Recherche ScientifiqueORCID 0000-0002-9129-4184Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:experimental assay· 1

Frequent Co-Authors

Patrice RaveliD· 2 shared Adrian Valente· 1 shared Audrey PageiD· 1 shared Benjamin AuditiD· 1 shared Clarisse Dubois· 1 shared Dina M. TawfikiD· 1 shared Ema EtchegarayiD· 1 shared Isabelle TreilleuxiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersSystems Biology

Patrice RavelORCID

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Author profile →

3 papers

Recent·Most cited

An extension of Modular Response Analysis for global perturbations and robust connectivity inference of gene regulatory networks.

Gabriel Jiménez-Domínguez, Benjamin Audit, Pierre Borgnat, Patrice Ravel, Jean‐Michel Arbona

This paper extends Modular Response Analysis to account for global perturbations and improves robustness in inferring gene regulatory networks.

bioRxiv · Jun 5, 2026 · PreprintSystems Biology

HERV-derived epitopes represent new targets for T-cell based immunotherapies in ovarian cancer

Paola Bonaventura, Audrey Page, Olivier Tabone, Yann Estornes, Virginie Mutez, Marie Delles, Sarah Moran, Clarisse Dubois, Thibault Richard, Marjorie Lacourrège, Marie Michelas, Dina M. Tawfik, Ema Etchegaray, Adrian Valente, Rasha E. Boulos, , Stéphane Depil

This study identifies HERV-derived epitopes as potential targets for T-cell immunotherapies in ovarian cancer, showing their expression in tumors and immunogenicity in patients.

Journal for ImmunoTherapy of Cancer · Aug 1, 2025Peer-reviewedImmunology

aiMeRA: A generic modular response analysis R package and its application to estrogen and retinoic acid receptors crosstalk

Gabriel Jiménez-Domínguez, Patrice Ravel, Stéphan Jalaguier, Vincent Cavaillès, Jacques Colinge

The paper introduces aiMeRA, an R package for modular response analysis, and applies it to study estrogen and retinoic acid receptor crosstalk using genomic data.

Scientific Reports · Mar 31, 2021Peer-reviewedSystems Biology