Author

Shu Wen Zhou

University of MichiganORCID 0000-0002-9211-0535Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

Yuheng DuiD· 3 shared Lana X. GarmireiD· 2 shared Shashank YadaviD· 2 shared Abdullah KaraaslanliiD· 1 shared Alzheimer’s Disease Neuroimaging Initiative· 1 shared Annie LeeiD· 1 shared Badri Narayan VardarajaniD· 1 shared Bing HeiD· 1 shared

Activity by Year

2023-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersBioinformatics

Yuheng DuORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

STDrug enables spatially informed personalized drug repurposing from spatial transcriptomics

Yiwen Yang, Thatchayut Unjitwattana, Shu Wen Zhou, Suguru Kadomoto, Xiaotong Yang, Tianao Chen, Abdullah Karaaslanli, Yuheng Du, Wanxing Zhang, Haodong Liang, Xuhui Guo, Evan T. Keller, Lana X. Garmire

STDrug improves drug repurposing by integrating spatial transcriptomics with machine learning to prioritize patient-specific therapies.

bioRxiv · Apr 7, 2026 · PreprintBioinformatics

Single-cell imaging based prognosis prediction identifies new breast cancer survival subtypes

Shashank Yadav, Shu Wen Zhou, Bing He, Yuheng Du, Lana X. Garmire

The paper uses single-cell imaging features to predict breast cancer patient survival and identifies seven survival subtypes with distinct cellular profiles.

Communications Medicine · Dec 19, 2023Peer-reviewedBioinformatics

Identification and Validation of New Molecular Subtypes within the Early and Late Mild Cognitive Impairment Stages of Alzheimer's Disease

Bowei Li, Shashank Yadav, Shu Wen Zhou, Yuheng Du, Leyuan Qian, Zachary Karas, Yueyang Zhang, Li Shen, Jenny J. Lee, Badri Narayan Vardarajan, Annie Lee, Lana Xia Garmire, Alzheimer’s Disease Neuroimaging Initiative

This study identifies and validates two molecular subtypes within early and late mild cognitive impairment stages of Alzheimer's disease using integrated metabolomics and transcriptomics data.

medRxiv · Apr 6, 2023 · PreprintGenetic & Genomic Medicine