Author

Caroline Denancé

Institut National de Recherche pour l'Agriculture, l'Alimentation et l'EnvironnementORCID 0009-0003-6618-6178Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 1 Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:GWAS summary statistics· 1 Organism:multiple species· 1 Organism:plant (other)· 1

Frequent Co-Authors

Charles-Éric DureliD· 2 shared Hélène MurantyiD· 2 shared Amandine CornilleiD· 1 shared Anamaria RomaniD· 1 shared Anthony VenoniD· 1 shared Anush A. NersesyaniD· 1 shared Astghik S. PapikyaniD· 1 shared Aurélie MesniliD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersPlant Biology

Charles-Éric DurelORCID

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3 papers

Recent·Most cited

Plant BiologybioRxivPreprintApr 10, 2026

Reduced confidence intervals and novel candidate genes for quantitative trait loci associated with apple scab resistance in Malus domestica

Romane Lapous, Camille Haquet, Caroline Denancé…·Julie Ferreira de Carvalho

This study identifies and validates five QTLs associated with apple scab resistance using transcriptomic data and high-resolution genotyping in a biparental population.

1 citation

bulk RNA-seqstatistical model

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GenomicsbioRxivPreprintNov 17, 2025

Contrasting genomic routes to domestication in Occidental and Oriental pears

Yuqi Nie, Xilong Chen, Somia Saidi…·Amandine Cornille

This study compares domestication routes in European and East Asian pears, finding weak bottlenecks, gene flow, and no cost-of-domestication effect.

1 citation

multiple specieswhole-genome sequencing

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GeneticsBMC GenomicsPeer-reviewedApr 7, 2021

Integration of Infinium and Axiom SNP array data in the outcrossing species Malus x domestica and causes for seemingly incompatible calls

Nicholas P. Howard, Michela Troggio, Charles-Éric Durel…·Eric W. Van De Weg

This paper integrates Infinium and Axiom SNP array data in apple, identifies compatible SNPs, and highlights challenges in data integration.

37 citations

plant (other)GWAS summary statistics

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