Author

Stefan Kröger

Robert Koch InstituteORCID 0000-0002-9457-4798Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:bacteria (other)· 1 Research Focus:clustering· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

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Bernhard Y. RenardiD· 1 shared Christine JandrasitsiD· 1 shared Walter HaasiD· 1 shared

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2019-2019 · peak 1/yr

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1 shared paperBioinformatics

Bernhard Y. RenardORCID

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1 paper

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedDec 9, 2019

Computational Pan-genome Mapping and pairwise SNP-distance improve Detection of Mycobacterium tuberculosis Transmission Clusters

Christine Jandrasits, Stefan Kröger, Walter Haas, Bernhard Y. Renard

This paper introduces PANPASCO, a method that improves detection of Mycobacterium tuberculosis transmission clusters by using pan-genome mapping and pairwise SNP-distance calculations.

19 citations

bacteria (other)whole-genome sequencing

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