Author

Christine Jandrasits

Robert Koch InstituteORCID 0000-0003-1357-4401Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Bernhard Y. RenardiD· 2 shared Piotr Wojciech DąbrowskiiD· 1 shared Stefan KrögeriD· 1 shared Stephan FuchsiD· 1 shared Walter HaasiD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

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5 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Bernhard Y. RenardORCID

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2 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedDec 9, 2019

Computational Pan-genome Mapping and pairwise SNP-distance improve Detection of Mycobacterium tuberculosis Transmission Clusters

Christine Jandrasits, Stefan Kröger, Walter Haas, Bernhard Y. Renard

This paper introduces PANPASCO, a method that improves detection of Mycobacterium tuberculosis transmission clusters by using pan-genome mapping and pairwise SNP-distance calculations.

19 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsBMC GenomicsPeer-reviewedJan 15, 2018

seq-seq-pan: Building a computational pan-genome data structure on whole genome alignment

Christine Jandrasits, Piotr Wojciech Dąbrowski, Stephan Fuchs, Bernhard Y. Renard

seq-seq-pan constructs a dynamic whole genome alignment framework for pan-genomics, enabling efficient updates and integration of multiple reference genomes.

35 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky