Author

Daniel M. Stoebel

Harvey Mudd CollegeORCID 0000-0002-9461-7567Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Approach:experimental assay· 1

Frequent Co-Authors

Alexander B. Lee· 1 shared Alexander EngiD· 1 shared Anne E. ClarkiD· 1 shared Carissa A. DeRanekiD· 1 shared Eliot BushiD· 1 shared Helen K. WuiD· 1 shared Johnson Hoang· 1 shared Juliet Forman· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Alexander B. Lee

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2 papers

Recent·Most cited

The transcriptional response to low temperature is weakly conserved across the Enterobacteriaceae

Johnson Hoang, Daniel M. Stoebel

This study examines the transcriptional response to low temperature in six Enterobacteriaceae species, finding limited conservation of gene expression changes and highlighting species-specific patterns.

mSystems · Nov 26, 2024Peer-reviewedMicrobiology

xenoGI: reconstructing the history of genomic island insertions in clades of closely related bacteria

Eliot Bush, Anne E. Clark, Carissa A. DeRanek, Alexander Eng, Juliet Forman, Kevin N. Heath, Alexander B. Lee, Daniel M. Stoebel, Zunyan Wang, Matthew Wilber, Helen K. Wu

xenoGI identifies genomic islands in bacterial clades and maps their insertion points on phylogenetic trees to study microbial evolution.

BMC Bioinformatics · Feb 5, 2018Peer-reviewedBioinformatics