Author

Xiaofei Xu

Sichuan UniversityORCID 0000-0002-9492-0312Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:fine-mapping· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Chao LiuiD· 2 shared Guanglin HeiD· 2 shared Jing CheniD· 2 shared Lan‐Hai WeiiD· 2 shared Mengge WangiD· 2 shared Qiuxia SuniD· 2 shared Shuhan DuaniD· 2 shared Yuntao SuniD· 2 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenetics

Chao LiuORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMar 7, 2023

Identification of mobile element insertion from whole genome sequencing data using deep neural network model

Fengxiao Bu, Xiaofei Xu, Yu Huang…·Huijun Yuan

The paper introduces DeepMEI, a deep learning tool for identifying mobile element insertions from whole-genome sequencing data, finding it outperforms existing methods and discovers more non-reference MEIs in 1000 Genome Project samples.

3 citations

humanwhole-genome sequencing

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GeneticsbioRxivPreprintJan 14, 2023

Differentiated genomic footprints and connections inferred from 440 Hmong-Mien genomes suggest their isolation and long-distance migration

Guanglin He, Jing Chen, Yan Liu…·Mengge Wang

This study analyzes 440 Hmong-Mien genomes to reveal genetic differentiation, admixture, and migration patterns, supporting isolation and long-distance migration.

2 citations

humanwhole-genome sequencing

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GeneticsbioRxivPreprintDec 20, 2022

Multiple founding paternal lineages inferred from the newly-developed SNPSeqTyper 639 Y-SNP panel suggested the complex admixture and migration history of Chinese people

Guanglin He, Mengge Wang, Jing Chen…·Le Wang

The paper develops a high-resolution Y-SNP panel to infer paternal lineages and admixture history in Chinese populations, revealing complex genetic diversity and migration patterns.

DOI 10.1101/2022.12.20.520342

humanDNA methylation

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