Author

Joshua S. Rest

Stony Brook UniversityORCID 0000-0002-9582-1041Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:mouse· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

A Chen· 1 shared Alan KuoiD· 1 shared Alejandro Gil-GómeziD· 1 shared Anna M. G. Novák VanclováiD· 1 shared Annika Hecker· 1 shared C West· 1 shared Chloe Wen· 1 shared Chris G. DaumiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperEvolutionary Biology

A Chen

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2 papers

Recent·Most cited

Oxygen-sensing regulatory architecture structures mammalian diversification

Jeroen Bert Smaers, Alejandro Gil-Gómez, Rosalind EM Rickaby, Christopher William Pugh, C West, P Aggarwal, Annika Hecker, A Chen, Chloe Wen, Markus Riessland, Joshua S. Rest

The paper analyzes oxygen-sensing regulatory architecture across 239 mammalian species, finding it tracks evolutionary transitions, ecological strategies, and cancer resistance.

bioRxiv · Jul 24, 2026 · PreprintEvolutionary Biology

Herpes-like viral elements and universal subtelomeric ribosomal RNA genes in a chromosome-scale thraustochytrid genome assembly

Jackie L. Collier, Joshua S. Rest, Lucie Gallot-Lavallée, Erik Lavington, Alan Kuo, Jerry W. Jenkins, Christopher Plott, Jasmyn L. Pangilinan, Chris G. Daum, Igor V. Grigoriev, Gina V. Filloramo, Anna M. G. Novák Vanclová, John M. Archibald

The paper presents a chromosome-scale genome assembly of Aurantiochytrium limacinum, revealing novel subtelomeric rDNA repeats and herpes-like viral elements.

bioRxiv · Jun 15, 2023 · PreprintGenomics