Author

Zhidong Yang

Chinese Academy of SciencesORCID 0000-0002-9738-0227Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:dimensionality reduction· 2 Research Focus:database / resource· 1 Approach:deep learning· 1 Assay:electronic health records· 1 Organism:human· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Chengmin LiiD· 1 shared Chuangyi HaniD· 1 shared Fa ZhangiD· 1 shared Hanchuan PengiD· 1 shared Hongjia LiiD· 1 shared Hui ZhangiD· 1 shared Jianfeng FengiD· 1 shared Jiangning SongiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

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10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Chengmin LiORCID

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2 papers

Recent·Most cited

BioinformaticsNature MethodsPeer-reviewedDec 31, 2025

Bridging the Dimensional Gap from Planar Spatial Transcriptomics to 3D Cell Atlases

Senlin Lin, Zhikang Wang, Yan Cui…·Zhiyuan Yuan

SpatialZ generates dense 3D cell atlases from planar spatial transcriptomics data by reconstructing virtual slices, validated with real 3D data and enabling new spatial analyses.

14 citationstop 4%

humanspatial transcriptomics

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedJan 28, 2022

Noise-Transfer2Clean: Denoising cryo-EM images based on noise modeling and transfer

Hongjia Li, Hui Zhang, Xiaohua Wan…·Fa Zhang

Noise-Transfer2Clean improves cryo-EM image denoising by modeling and transferring noise characteristics, achieving better signal restoration than existing methods.

31 citations

electronic health recordsdeep learning

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