Author

Christophe Rodriguez

Assistance Publique – Hôpitaux de ParisORCID 0000-0002-9817-5006Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:metagenomics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

A. WerneriD· 1 shared André BirgyiD· 1 shared Assiya El Mniai· 1 shared Cécile AngebaultiD· 1 shared Corinne LévyiD· 1 shared Emmanuelle VaroniD· 1 shared François AngoulvantiD· 1 shared François Corrard· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperMicrobiology

A. WernerORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintJul 1, 2026

Quantifying the mechanisms of vaccine-induced serotype replacement in Streptococcus pneumoniae using genome-informed modelling

Zein Assad, Kévin La, Corinne Lévy…·Naïm Ouldali

The paper quantifies how serotype replacement in Streptococcus pneumoniae is driven by shifts in serotypes within persistent lineages rather than lineage replacement, using genome-informed modeling and longitudinal data.

DOI 10.64898/2026.06.29.735370

whole-genome sequencingstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintMar 20, 2026

Performance of shotgun metagenomic sequencing for detection of fungi and parasites across clinical sample types: a multicenter retrospective study.

Théo Ghelfenstein-Ferreira, Cécile Angebault, Vanessa Démontant…·Françoise Botterel

This study evaluates shotgun metagenomic sequencing for detecting fungi and parasites in clinical samples, finding it performs well with sample-specific thresholds.

2 citations

metagenomicsstatistical model

𝕏 PostBluesky