Author

Jesse Zaneveld

University of Washington BothellORCID 0000-0002-9823-810XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Ecology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:benchmark study· 2 Research Focus:benchmarking· 2 Research Focus:cell type annotation· 2 Organism:human· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Jacqueline L. Padilla‐GamiñoiD· 2 shared Tanya BrowniD· 2 shared Brook L. NunniD· 1 shared Carly Danielle KenkeliD· 1 shared Christopher M. TayloriD· 1 shared Curtis HuttenhoweriD· 1 shared Dylan SonettiD· 1 shared E. B. Timmins-SchiffmaniD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersEcology

Jacqueline L. Padilla‐GamiñoORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Resilience in a time of stress: revealing the molecular underpinnings of coral survival following thermal bleaching events

Brook L. Nunn, Tanya Brown, E. B. Timmins-Schiffman, Miranda C. Mudge, Michael E. Riffle, Jeremy B. Axworthy, Jenna Dilworth, Carly Danielle Kenkel, Jesse Zaneveld, Lisa J. Rodrigues, Jacqueline L. Padilla‐Gamiño

This study identifies molecular biomarkers of coral resilience to thermal bleaching by comparing proteomic, microbiome, and physiological traits of surviving and dying corals.

Communications Earth & Environment · Mar 8, 2025Peer-reviewedEcology

The Organelle in the Ointment: cryptic mitochondria account for many unknown sequences in cross-species microbiome comparisons

Dylan Sonett, Tanya Brown, Johan Bengtsson‐Palme, Jacqueline L. Padilla‐Gamiño, Jesse Zaneveld

The paper identifies that under-annotation of mitochondrial rRNA sequences in microbiome studies leads to biased results and proposes improving taxonomies to better annotate these sequences.

bioRxiv · Feb 23, 2021 · PreprintBioinformatics

PICRUSt2: An improved and customizable approach for metagenome inference

Gavin M. Douglas, Vincent J. Maffei, Jesse Zaneveld, Svetlana N. Yurgel, James R. Brown, Christopher M. Taylor, Curtis Huttenhower, Morgan G. I. Langille

PICRUSt2 places 16S rRNA variants into a 20,000-gene reference tree, predicting gene families, pathways and phenotypes; gene-family predictions matched or beat four tools against shotgun metagenomes.

bioRxiv · Mar 20, 2020 · PreprintBioinformatics✦ In-depth digest