Author

Jiaxing Bai

Xiamen UniversityORCID 0000-0003-0029-1373Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:whole-genome sequencing· 2 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Assay:DNA methylation· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Yang Young LuiD· 2 shared Yiwen WangiD· 2 shared Fang ZhangiD· 1 shared Fengzhu SuniD· 1 shared Ying Wang· 1 shared Ying WangiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

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2 shared papersBioinformatics

Yang Young LuORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 20, 2021

SAINT: automatic taxonomy embedding and categorization by Siamese triplet network

Yang Young Lu, Yiwen Wang, Fang Zhang…·Ying Wang

SAINT is an alignment-free sequence comparison method using a Siamese triplet network for efficient and accurate taxonomy embedding and categorization.

DOI 10.1101/2021.01.20.426920

DNA methylationwhole-genome sequencing

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedAug 4, 2020

CRAFT: Compact genome Representation towards largescale Alignment-Free daTabase

Yang Young Lu, Jiaxing Bai, Yiwen Wang…·Fengzhu Sun

CRAFT learns compact sequence representations for fast alignment-free comparison of genomic and metagenomic data, achieving efficient storage and query performance.

5 citations

whole-genome sequencingmetagenomics

𝕏 PostBluesky