Author

Yuichi Togashi

Hiroshima UniversityORCID 0000-0003-0032-2424Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 1 Assay:Hi-C· 1 Organism:human· 1 Assay:imaging· 1 Approach:simulation· 1 Approach:statistical model· 1

Frequent Co-Authors

Soya ShinkaiiD· 2 shared Hiroshi OchiaiiD· 1 shared Kazuhiro Maeshima· 1 shared Masaki NakagawaiD· 1 shared Ryuichiro NakatoiD· 1 shared Shuichi OnamiiD· 1 shared Tadasu Nozaki· 1 shared Takeshi SugawaraiD· 1 shared

Activity by Year

2016-2020 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 24 mutual co-author links

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2 shared papersBioinformatics

Soya ShinkaiORCID

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2 papers

Recent·Most cited

BioinformaticsNAR Genomics and BioinformaticsPeer-reviewedMar 31, 2020

PHi-C: deciphering Hi-C data into polymer dynamics

Soya Shinkai, Masaki Nakagawa, Takeshi Sugawara…·Shuichi Onami

PHi-C simulates dynamic 3D genome features from Hi-C data, aligning with live-cell imaging observations and providing physical insights.

50 citations

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BiophysicsPLOS Computational BiologyPeer-reviewedOct 20, 2016

Dynamic Nucleosome Movement Provides Structural Information of Topological Chromatin Domains in Living Human Cells

Soya Shinkai, Tadasu Nozaki, Kazuhiro Maeshima, Yuichi Togashi

The paper uses single-nucleosome imaging and a polymer model to show that nucleosome movement within chromatin domains is subdiffusive and reflects domain structure and compactness.

DOI 10.1371/journal.pcbi.1005136

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