Alexander J. Gates

The paper introduces a method using cross-linking mass spectrometry to analyze structural changes in Tau and phosphorylated Tau proteins during aggregation.

CluSim is a Python package that provides over 20 similarity measures for comparing clusterings and dendrograms, with examples on gene expression data and phylogenetic trees.

Corrected Rand index and mutual information under random ensembles where cluster number and sizes vary; the chosen null model can reorder which clusterings look most alike.