Author

Melanie N. Cash

University of FloridaORCID 0000-0003-0144-7878Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Organism:mouse· 1 Organism:non-human primate· 1 Research Focus:phylogenetics / evolution· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Marco SalemiiD· 2 shared Adam Browning· 1 shared Andrea S Ramirez-Mata· 1 shared Andrew K. Ding· 1 shared Brittany Rife MagalisiD· 1 shared Cinar Efe Sumer· 1 shared Faezeh Rafiei· 1 shared Hai Duc NguyeniD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersImmunology

Marco SalemiORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintOct 20, 2026

The increased production of monocytes with immunosuppressive transcriptional profiles predicts the development of SIV encephalitis

Hai Duc Nguyen, Andrew K. Ding, Cinar Efe Sumer…·Woong‐Ki Kim

The study identifies immunosuppressive monocytes predicting SIV encephalitis by analyzing their transcriptional changes during infection.

DOI 10.64898/2026.10.14.759063

non-human primatebulk RNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 4, 2022

Defective HIV DNA genomes provide ancestral relevance critical for phylogenetic inference of reservoir dynamics

Lauren E. Droske, Andrea S Ramirez-Mata, Melanie N. Cash…·Brittany Rife Magalis

The paper uses single-cell DNA sequencing to show that defective HIV genomes contribute to phylogenetic inference of reservoir dynamics in an animal model.

DOI 10.1101/2022.05.04.490630

𝕏 PostBluesky