Author

Zachary S. Wallace

University of California San DiegoORCID 0000-0003-0237-501XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:GWAS summary statistics· 1 Organism:human· 1 Research Focus:polygenic risk· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Amit R. MajithiaiD· 1 shared Hojung NamiD· 1 shared Ingoo LeeiD· 1 shared Sungjoon ParkiD· 1 shared Trey E. IdekeriD· 1 shared Yuqi WangiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Amit R. MajithiaORCID

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1 paper

Recent·Most cited

A genotype-phenotype transformer to assess and explain polygenic risk

Ingoo Lee, Zachary S. Wallace, Yuqi Wang, Sungjoon Park, Hojung Nam, Amit R. Majithia, Trey E. Ideker

This paper introduces a Transformer model called G2PT to predict metabolic traits from genetic variants and shows it outperforms existing methods across populations.

bioRxiv · Oct 23, 2024 · PreprintBioinformatics