A genotype-phenotype transformer to assess and explain polygenic risk
Ingoo Lee, Zachary S. Wallace, Yuqi Wang, Sungjoon Park, Hojung Nam, Amit R. Majithia, Trey E. Ideker
This paper introduces a Transformer model called G2PT to predict metabolic traits from genetic variants and shows it outperforms existing methods across populations.
bioRxiv · Oct 23, 2024 · PreprintBioinformatics