Author

Selin Pekel

Leiden UniversityORCID 0000-0003-0277-8644Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1

Frequent Co-Authors

Adam T. GrundhoffiD· 1 shared Andrew David BeggsiD· 1 shared Athanasios TypasiD· 1 shared Boris NoyvertiD· 1 shared C. David Wood· 1 shared Christian SchudomaiD· 1 shared Christy Susan VargheseiD· 1 shared Csilla VárnaiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMicrobiology

Adam T. GrundhoffORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

MicrobiologyNature MicrobiologyPeer-reviewedApr 24, 2026

Large-scale computational analyses of gut microbial CAZyme repertoires enabled by Cayman

Quinten R. Ducarmon, Nicolai Karcher, Samir Giri…·Georg Zeller

The paper develops Cayman, a CAZyme profiler, to analyze gut microbial CAZyme repertoires and finds differences in substrate preferences between Western and non-Western metagenomes and CRC patients.

28 citationstop 1%

humanmetagenomics

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MicrobiologyPLoS PathogensPeer-reviewedJan 27, 2025

Repression of CADM1 transcription by HPV type 18 is mediated by three-dimensional rearrangement of promoter-enhancer interactions

Karen Campos-León, Jack Ferguson, Thomas Günther…·Joanna L. Parish

This study shows that HPV18 infection reprograms host transcription by altering CTCF binding and promoter-enhancer interactions, leading to repression of the tumor suppressor CADM1.

3 citations

humanbulk RNA-seq

𝕏 PostBluesky