Author

Elena Lopez Girona

Plant & Food ResearchORCID 0000-0003-0376-6135Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Andrew S. CatanachiD· 1 shared Arnau FioliD· 1 shared Ashleigh ListeriD· 1 shared Darren HeavensiD· 1 shared David BakeriD· 1 shared David ChagnéiD· 1 shared Deepa R. Bowatte· 1 shared Elena HilarioiD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperGenomics

Andrew S. CatanachORCID

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3 papers

Recent·Most cited

Molecular BiologyPlant MethodsPeer-reviewedAug 27, 2022

An efficient CRISPR-Cas9 enrichment sequencing strategy for characterizing complex and highly duplicated genomic regions. A case study in the Prunus salicina LG3-MYB10 genes cluster.

Arnau Fiol, Federico Jurado-Ruiz, Elena Lopez Girona, María José Aranzana

The paper improves CRISPR-Cas9 enrichment with long-read sequencing to characterize complex genomic regions, identifying SNPs and SVs in the MYB10 gene cluster of Prunus salicina.

16 citations

plant (other)long-read sequencing

𝕏 PostBluesky

GenomicsBMC GenomicsPeer-reviewedNov 2, 2021

The genome of New Zealand trevally (Carangidae: Pseudocaranx georgianus) uncovers a XY sex determination locus

Mike Ruigrok, Andrew S. Catanach, Deepa R. Bowatte…·Maren Wellenreuther

The paper reports the genome of New Zealand trevally, identifies a XY sex determination locus, and finds a likely role for the cyp19b-like gene in sex determination.

27 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsGigaSciencePeer-reviewedJan 9, 2019

A critical comparison of technologies for a plant genome sequencing project

Pirita Paajanen, George Kettleborough, Elena Lopez Girona…·Matthew D. Clark

This paper compares genome assembly technologies for the potato species S. verrucosum, evaluating their completeness, accuracy, cost, and computational requirements.

64 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky