Author

Erik K. Flemington

Tulane UniversityORCID 0000-0003-0513-5281Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Genetics· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Approach:experimental assay· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1

Frequent Co-Authors

Nathan Ungerleider· 2 shared Alexie Smith· 1 shared Amna Malik· 1 shared Amr ElkholyiD· 1 shared Anandita Ghosh· 1 shared Arthur J. LustigiD· 1 shared Bohye ParkiD· 1 shared Caitlin A. HarveyiD· 1 shared

Activity by Year

2019-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersPathology

Nathan Ungerleider

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4 papers

Recent·Most cited

Cancer BiologybioRxivPreprintSep 29, 2026

SON-mediated circular RNA suppression promotes PKR signaling and radiation resistance in glioblastoma

Caitlin A. Harvey, Sophia Dunlap, Mostafa Mohamed…·Eun-Young Erin Ahn

This study identifies SON as a suppressor of circRNA biogenesis in glioblastoma, linking circRNA depletion to PKR signaling and radiation resistance.

DOI 10.64898/2026.09.28.755153

humanbulk RNA-seq

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PathologybioRxivPreprintMay 23, 2026

A BRRF1-CCR4-NOT axis underlies conserved transcriptome-wide loss of splicing fidelity during gammaherpesvirus reactivation

Trang T Nguyen, Anandita Ghosh, Nadeeshika Wickramarachchige-Dona…·Erik K. Flemington

The paper identifies BRRF1 as a key driver of transcriptome-wide splicing defects during gammaherpesvirus reactivation by hijacking the CCR4-NOT complex.

1 citation

humanbulk RNA-seq

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GeneticsbioRxivPreprintJan 14, 2025

Clustering of Inverted Triplications in Centromeric and Subtelomeric Chromosomal Regions of Aspergillus flavus

Jeffrey W. Cary, Amna Malik, Alexie Smith…·Arthur J. Lustig

This study identifies spontaneous inverted triplications (TRP/INVs) in Aspergillus flavus, showing they form in AT-rich centromeric and subtelomeric regions due to palindromic sequences and replication stress.

DOI 10.1101/2025.01.14.632981

fungi (other)whole-genome sequencing

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BioinformaticsBMC BioinformaticsPeer-reviewedMay 8, 2019

SpliceV: Analysis and publication quality printing of linear and circular RNA splicing, expression and regulation.

Nathan Ungerleider, Erik K. Flemington

SpliceV is a tool for visualizing and analyzing RNA splicing, including linear and circular RNA, providing publication-quality plots and regulatory insights.

11 citations

bulk RNA-seqstatistical model

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