Jack M. Craig

TaxaAudit identifies non-monophyletic taxa by analyzing phylogenies, improving taxonomy agreement with reference trees and reducing reliance on specialist literature.

This study develops a sample-specific transformer model to improve genotype imputation from sparse single-cell RNA sequencing data, enhancing the recovery of genetic cell types.

This paper introduces Chrono-STA, a method to integrate molecular phylogenies with chronological data to build a supertree, showing improved accuracy over existing methods for data with limited species overlap.