Author

Jingmin Hua

University of BernORCID 0000-0003-0669-5192Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:plant (other)· 1

Frequent Co-Authors

Rodrigo Siqueira ReisiD· 2 shared Chen XiaoiD· 1 shared Dolly MehtaiD· 1 shared Dominique Jacques VuaramboniD· 1 shared Shitij GuptaiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Rodrigo Siqueira ReisORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 6, 2025

RNA structure conservation in plastids across plant evolution

Dolly Mehta, Chen Xiao, Jingmin Hua, Rodrigo Siqueira Reis

The paper identifies conserved RNA structures in plastid genomes across plants using a covariation-based pipeline, revealing known and novel regulatory elements.

DOI 10.1101/2025.08.06.668526

plant (other)DNA methylation

Plant BiologybioRxivPreprintAug 5, 2025

Transcriptional response to warm temperatures is confounded by organ-specificity

Jingmin Hua, Shitij Gupta, Dominique Jacques Vuarambon, Rodrigo Siqueira Reis

The paper shows that whole seedling transcriptomic data in Arabidopsis thaliana is confounded by organ-specific responses to warmth, with ~70% of DEGs not being organ-specific.

DOI 10.1101/2025.08.05.668523

Arabidopsisbulk RNA-seq