Author

Marharyta Blazhynska

Centre National de la Recherche ScientifiqueORCID 0000-0003-0749-8772Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:deep learning· 3 Approach:statistical model· 3 Research Focus:protein folding & dynamics· 2 Assay:structural biology· 2 Organism:virus· 2 Research Focus:drug response / drug discovery· 1 Assay:protein structure· 1

Frequent Co-Authors

Jean‐Philip PiquemaliD· 3 shared Louis LagardèreiD· 3 shared Olivier AdjouaiD· 2 shared Chengwen LiuiD· 1 shared Narjes AnsariiD· 1 shared Pengyu Y. ReniD· 1 shared Zoe Vetter· 1 shared

Activity by Year

2024-2025 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 15 mutual co-author links

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3 shared papersBiophysics

Jean‐Philip PiquemalORCID

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3 papers

Recent·Most cited

Enhanced Sampling Enables Binding Site Water Reorganization in Polarizable Absolute Binding Free Energy Calculations

Marharyta Blazhynska, Narjes Ansari, Louis Lagardère, Jean‐Philip Piquemal

The paper improves binding free energy calculations by enabling accurate water reorganization through enhanced sampling methods.

bioRxiv · Oct 17, 2025 · PreprintBiophysics

Satellite Tobacco Mosaic Virus: Revealing Environmental Drivers of Capsid and Nucleocapsid Plasticity using High-Resolution Simulations

Marharyta Blazhynska, Olivier Adjoua, Zoe Vetter, Louis Lagardère, Jean‐Philip Piquemal

This study uses high-resolution simulations to show how pH and ionic conditions affect the structural dynamics and plasticity of STMV capsids and nucleocapsids.

bioRxiv · Jan 28, 2025 · PreprintBiophysics

Water-Glycan Interactions Drive the SARS-CoV-2 Spike Dynamics: Insights into Glycan-Gate Control and Camouflage Mechanism

Marharyta Blazhynska, Louis Lagardère, Chengwen Liu, Olivier Adjoua, Pengyu Y. Ren, Jean‐Philip Piquemal

The paper uses molecular dynamics simulations to analyze water-glycan interactions in SARS-CoV-2 spike protein states, revealing structural and dynamic differences that impact immune evasion.

Chemical Science · Jan 1, 2024Peer-reviewedBiophysics