Author

Emmanuel Coton

Institut National de Recherche pour l'Agriculture, l'Alimentation et l'EnvironnementORCID 0000-0003-0912-8804Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:fungi (other)· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1

Frequent Co-Authors

Monika CotoniD· 3 shared Tatiana GiraudiD· 3 shared Alodie SnirciD· 2 shared Ewen CrequeriD· 2 shared Gwennina Cueff· 2 shared Jean‐Luc JanyiD· 2 shared Ricardo C. Rodŕıguez de la VegaiD· 2 shared Adeline SimoniD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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3 shared papersEvolutionary Biology

Monika CotonORCID

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3 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintOct 9, 2026

Cheese adaptation beyond Penicillium: contrasting genomic trajectories in the distantly related Nectriaceae molds

Lily D. Peck, Jean‐Luc Jany, Monika Coton…·Jeanne Ropars

This study compares genomic adaptations of cheese-associated Nectriaceae fungi, revealing contrasting evolutionary paths involving gene family expansions, reductions, and horizontal gene transfer.

DOI 10.64898/2026.10.08.757356

whole-genome sequencingstatistical model

𝕏 PostBluesky

Evolutionary BiologyPLoS GeneticsPeer-reviewedApr 15, 2025

Generation of diversity in the blue cheese mold Penicillium roqueforti and identification of pleiotropic QTL for key cheese-making phenotypes

Thibault Caron, Ewen Crequer, Mélanie Le Piver…·Tatiana Giraud

This study identifies pleiotropic QTLs for key cheese-making traits in Penicillium roqueforti by analyzing F1 hybrids from cheese and non-cheese populations.

5 citations

fungi (other)whole-genome sequencing

𝕏 PostBluesky

MicrobiologyIMA FungusPeer-reviewedNov 28, 2024

Different metabolite profiles across Penicillium roqueforti populations associated with ecological niche specialisation and domestication

Ewen Crequer, Emmanuel Coton, Gwennina Cueff…·Monika Coton

The paper compares metabolite profiles across Penicillium roqueforti populations to identify differences linked to ecological niche specialization and domestication.

11 citations

fungi (other)metabolomics

𝕏 PostBluesky