Author

Tomasz Kowalski

Lodz University of TechnologyORCID 0000-0003-0953-3762Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:whole-genome sequencing· 3 Research Focus:database / resource· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Szymon GrabowskiiD· 3 shared

Activity by Year

2019-2022 · peak 1/yr

3 papers

Recent·Most cited

BioinformaticsGigaSciencePeer-reviewedJan 1, 2022

MBGC: Multiple Bacteria Genome Compressor

Szymon Grabowski, Tomasz Kowalski

MBGC is a specialized genome compressor for bacteria that achieves high compression ratios and speeds, outperforming existing tools on bacterial genomes.

17 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMay 1, 2020

Engineering the Compression of Sequencing Reads

Tomasz Kowalski, Szymon Grabowski

The paper introduces an optimized, multi-threaded version of PgRC, a FASTQ compressor that improves compression time while maintaining compression ratio and decompression speed.

3 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedDec 5, 2019

PgRC: Pseudogenome based Read Compressor

Tomasz Kowalski, Szymon Grabowski

PgRC compresses DNA sequencing data more efficiently than existing tools while maintaining comparable decompression speed.

25 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky