Author

Yōichirō Takahashi

Lieber Institute for Brain DevelopmentORCID 0000-0003-1156-2984Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 1

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Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Andrew E. JaffeiD· 1 shared BaDoi N. PhaniD· 1 shared Keri MartinowichiD· 1 shared Kristen R. MaynardiD· 1 shared Madhavi TippaniiD· 1 shared Thomas M. HydeiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperNeuroscience

Andrew E. JaffeORCID

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1 paper

Recent·Most cited

NeuroscienceNucleic Acids ResearchPeer-reviewedApr 20, 2020

dotdotdot: an automated approach to quantify multiplex single molecule fluorescent in situ hybridization (smFISH) images in complex tissues

Kristen R. Maynard, Madhavi Tippani, Yōichirō Takahashi…·Keri Martinowich

The paper introduces dotdotdot, a software tool for quantifying smFISH images in complex tissues, demonstrating its use in mouse neurons and human brain tissue with autofluorescence masking and machine learning for cell type prediction.

83 citationstop 3%

mousehuman

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