Author

Jan Lisec

Federal Institute For Materials Research and TestingORCID 0000-0003-1220-2286Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1 Assay:metabolomics· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Alexander Kister· 1 shared Farhad Ali ShahiD· 1 shared Francesco F. Russo· 1 shared Hina UsmaniD· 1 shared Knut ReinertiD· 1 shared Mohammad Khalid· 1 shared Naila Noureen· 1 shared Nousheen ZaidiiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alexander Kister

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2 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedMar 7, 2025

Fiora: Local neighborhood-based prediction of compound mass spectra from single fragmentation events

Yannek Nowatzky, Francesco F. Russo, Jan Lisec…·Philipp Benner

Fiora predicts compound mass spectra from single fragmentation events using graph neural networks, outperforming existing methods and enabling faster spectral library expansion.

22 citationstop 2%

metabolomicsgraph neural network

𝕏 PostBluesky

Molecular BiologyPLoS ONEPeer-reviewedSep 11, 2020

Revisiting the Association between Human Leukocyte Antigen and End-Stage Renal Disease

Naila Noureen, Farhad Ali Shah, Jan Lisec…·Nousheen Zaidi

This study reanalyzes the association between HLA alleles and ESRD, identifying significant associations and ethnic-specific patterns.

11 citations

humanstatistical model

𝕏 PostBluesky