Author

Rakesh Mukherjee

Imperial College LondonORCID 0000-0003-1276-6137Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:synaptic & neural circuits· 1

Frequent Co-Authors

Križan Jurinović· 2 shared Merry MitraiD· 2 shared Thomas E. OuldridgeiD· 2 shared Jordan JuritziD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

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4 top collaborators · 6 mutual co-author links

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2 shared papersBiophysics

Križan Jurinović

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2 papers

Recent·Most cited

BiophysicsJournal of the American Chemical SocietyPeer-reviewedJul 30, 2026

Fuel-driven catalytic molecular templating

Merry Mitra, Rakesh Mukherjee, Križan Jurinović, Thomas E. Ouldridge

This paper introduces an enzyme-free DNA-based templated dimerization reaction controlled by a fuel strand that displaces product to overcome inhibition, enabling information propagation from templates.

1 citation

DNA methylationexperimental assay

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BiophysicsbioRxivPreprintJun 24, 2026

Far-from-equilibrium assembly of multimers through DNA-based catalytic templating

Rakesh Mukherjee, Merry Mitra, Križan Jurinović…·Thomas E. Ouldridge

This paper introduces an enzyme-free DNA strand displacement network that uses DNA templates to assemble non-covalent DNA multimers under isothermal conditions, achieving far-from-equilibrium product formation.

1 citation

DNA methylationdeep learning

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