Author

Chia-Yu Chen

Harvard UniversityORCID 0000-0003-1342-2184Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 2 Organism:human· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Alex K. ShalekiD· 2 shared Sizun JiangiD· 2 shared Stephanie Pei Tung YiuiD· 2 shared Wenrui WuiD· 2 shared Ye Won ChoiD· 2 shared Amelia R. Schroeder· 1 shared Anki Basak· 1 shared Ankit Basak· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersGenomics

Alex K. ShalekORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintMar 5, 2026

Toward Computationally Complete Spatial Omics

Wei Li, Liran Mao, Yunhe Liu…·Ming Li

COSIE is a computational framework that integrates multiple spatial omics modalities to generate high-resolution molecular landscapes, outperforming existing methods across diverse datasets.

1 citation

humanspatial transcriptomics

𝕏 PostBluesky

Systems BiologybioRxivPreprintDec 20, 2024

Same-Slide Spatial Multi-Omics Integration Reveals Tumor Virus-Linked Spatial Reorganization of the Tumor Microenvironment

Yao Yu Yeo, Yuzhou Chang, Huaying Qiu…·Sizun Jiang

This paper introduces IN-DEPTH and SGCC for spatial multi-omics analysis, revealing EBV-related immunomodulatory differences in DLBCL.

12 citations

humanspatial transcriptomics

𝕏 PostBluesky