Author

Jakob B. Butler

University of TasmaniaORCID 0000-0003-1353-3765Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 2 Genomics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Research Focus:differential expression· 2 Research Focus:variant calling· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1

Frequent Co-Authors

James L. WelleriD· 2 shared Jazmine L. HumphreysiD· 2 shared Kirstin E. BettiD· 2 shared Raúl OrtegaiD· 2 shared Steven M. SmithiD· 2 shared Alejandro Correa‐LozanoiD· 1 shared Brian J. AtwelliD· 1 shared Derek M. WrightiD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersGenetics

James L. WellerORCID

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4 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 29, 2026

Genome assembly of the C4 grass Themeda triandra confirms karyotype orthology with sorghum and reveals genetic variation across diverse environments

Jakob B. Butler, Jazmine L. Humphreys, Theodore R. Allnutt…·Brian J. Atwell

The paper assembles the genome of Themeda triandra, finds syntenic relationships with sorghum, and identifies genetic variation linked to environmental adaptation.

DOI 10.64898/2026.03.18.712786

plant (other)whole-genome sequencing

𝕏 PostBluesky

Plant BiologybioRxivPreprintMar 13, 2026

Rapid reversible RNA isoform switching during loss and recovery of turgor in Arabidopsis thaliana

Jazmine L. Humphreys, Luke A. Yates, Jakob B. Butler, Steven M. Smith

The paper identifies rapid reversible RNA isoform switching in Arabidopsis thaliana during water deficit and recovery, revealing new protein products and mechanisms of stress response.

DOI 10.64898/2026.03.12.711442

Arabidopsisbulk RNA-seq

𝕏 PostBluesky

GeneticsThe Plant GenomePeer-reviewedOct 25, 2022

Focusing the GWAS Lens on days to flower using latent variable phenotypes derived from global multi-environment trials

Sandesh Neupane, Derek M. Wright, Raúl Ortega…·Kirstin E. Bett

The paper uses GWAS on latent variable phenotypes from multi-environment trials to identify flowering time genes and QTL in lentil, enhancing understanding of phenology-related traits.

20 citations

GWAS summary statisticsstatistical model

𝕏 PostBluesky

GeneticsJournal of Experimental BotanyPeer-reviewedMar 11, 2022

Genetic analysis of early phenology in lentil identifies distinct loci controlling component traits

Vinodan Rajandran, Raúl Ortega, Jacqueline K. Vander Schoor…·James L. Weller

The paper identifies two loci, DTF6a and DTF6b, that control early flowering in lentil, with DTF6a being sufficient for early flowering even in short photoperiods.

26 citationstop 4%

statistical modelgene regulatory network inference

𝕏 PostBluesky