Author

Kaidi Cao

Stanford UniversityORCID 0000-0003-1519-4576Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:ATAC-seq· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Garry P. NolaniD· 2 shared John W. HickeyiD· 2 shared Jure LeskoveciD· 2 shared Maria BrbićiD· 2 shared Michael P. SnyderiD· 2 shared Aaron M. HorningiD· 1 shared Almudena Espín-PéreziD· 1 shared Annika K K WeimeriD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Garry P. NolanORCID

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2 papers

Recent·Most cited

BioinformaticsNature MethodsPeer-reviewedOct 24, 2022

Annotation of Spatially Resolved Single-cell Data with STELLAR

Maria Brbić, Kaidi Cao, John W. Hickey…·Jure Leskovec

STELLAR annotates spatially resolved single-cell data using geometric deep learning, discovering cell types and states while transferring annotations across tissues and donors.

122 citationstop 1%

humanspatial transcriptomics

𝕏 PostBluesky

GenomicsbioRxivPreprintNov 25, 2021

High Resolution Single Cell Maps Reveals Distinct Cell Organization and Function Across Different Regions of the Human Intestine

John W. Hickey, Winston R. Becker, Stephanie A. Nevins…·Michael P. Snyder

The paper maps cell organization and function across human intestine regions using single nuclear RNA and open chromatin assays, revealing distinct cell neighborhoods and regulatory differences.

15 citations

humanbulk RNA-seq

𝕏 PostBluesky