Author

Xiaolan Chen

Tongji UniversityORCID 0000-0003-1581-5045Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Developmental Biology· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Approach:statistical model· 3 Assay:ATAC-seq· 2 Research Focus:database / resource· 2 Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Yong ZhangiD· 3 shared Chenfei WangiD· 1 shared Chengchen ZhaoiD· 1 shared Chong LiiD· 1 shared Chuan CheniD· 1 shared Hailong HuangiD· 1 shared Haiwei WangiD· 1 shared Hong Wang· 1 shared

Activity by Year

2017-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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3 shared papersBioinformatics

Yong ZhangORCID

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Author profile →

4 papers

Recent·Most cited

Developmental BiologyCell ResearchPeer-reviewedApr 15, 2022

Dynamic nucleosome organization after fertilization reveals regulatory factors for mouse zygotic genome activation

Chenfei Wang, Chuan Chen, Xiaoyu Liu…·Shaorong Gao

The paper studies nucleosome dynamics in mouse zygotes after fertilization, identifying factors involved in zygotic genome activation.

40 citations

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GeneticsbioRxivPreprintMar 17, 2022

A novel PLS1 c.981+1G>A variant causes autosomal-dominant hereditary hearing loss in a family via up-regulation of the PI3K-Akt signaling pathway

Liangpu Xu, Xinrui Wang, Jia Li…·Hua Cao

The paper identifies a novel PLS1 variant causing autosomal-dominant hearing loss by inducing exon8 skipping and upregulating the PI3K-Akt pathway in zebrafish.

DOI 10.1101/2022.03.17.484618

zebrafishbulk RNA-seq

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BioinformaticsbioRxivPreprintSep 11, 2018

NUCOME: A Comprehensive Database of Nucleosome Organizations in Mammalian Genomes

Xiaolan Chen, Hui Yang, Yong Zhang

NUCOME organizes and provides standardized nucleosome organization data from MNase-seq across human and mouse cell types for downstream analysis.

DOI 10.1101/414094

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BioinformaticsPLoS ONEPeer-reviewedAug 7, 2017

CAM: A Quality Control Pipeline For MNase-Seq Data

Shengen Shawn Hu, Xiaolan Chen, Liao Ji…·Yong Zhang

CAM provides a comprehensive quality control pipeline for MNase-seq data, including QC measurements and a reference atlas of 268 datasets from human and mouse.

10 citations

𝕏 PostBluesky